BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A08SP1|AL430157
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1588 0.0
>3x_Contig1401
Length = 8231
Score = 1588 bits (791), Expect = 0.0
Identities = 870/899 (96%), Gaps = 8/899 (0%)
Strand = Plus / Plus
Query: 1 ttctggaaacgagagtmacggatcagatgaacataccaaccataattctaaccaaaacta 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3192 ttctggaaacgagagtaacggatcagatgaacataccaaccataattctaaccaaaacta 3251
Query: 61 ttccaacaattttaagtttagagataawgacaawaacgwwaacaatggatctgacaggta 120
||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||
Sbjct: 3252 ttccaacaattttaagtttagagataatgacaataacgttaacaatggatctgacaggta 3311
Query: 121 wgawaacaacaatggtaacacgtcgtggtagaggtaacttccgtggtaggggwcgtggag 180
|| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 3312 tgataacaacaatggtaac-cgtcgtggtagaggtaacttccgtggtaggggtcgtggag 3370
Query: 181 gawaccgatggagatcactccaaaaacggaagcagatacaattccgattacgaacaacaa 240
|| |||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 3371 gataccg-tggtgatcactccaacaacggaagcagatacaattccgatt-cgaacaacaa 3428
Query: 241 cwaccawaagaagtttgatgacagatcccaacagcaacaacaatacggtctatttgctcc 300
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429 ctaccataagaagtttgatgacagatcccaacagcaacaacaatacggtctatttgctcc 3488
Query: 301 agcagctggtttcttgaaggatcaaaacagaggtggtcattcttcatctggtggtcgtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3489 agcagctggtttcttgaaggatcaaaacagaggtggtcattcttcatctggtggtcgtgg 3548
Query: 361 tcgtggtagaggtcgtggcggcagagaccggagagtggcagaggcggcagaggccgtggt 420
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 3549 tcgtggtagaggtcgtggcggcagagaccgggg--tggcagaggcggcagaggccgtggt 3606
Query: 421 tcttcttccactgactgagcgtttaccttttcataatatcgavattttccgcagcaatgc 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3607 tcttcttccactgactgagcgtttaccttttcataatatcgaaattttccgcagcaatgc 3666
Query: 481 tggacgctgatctaaaacgcgcattgaagtgcagttgaacgtaagtrnaggaaaccatat 540
||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3667 tgg-cgctg-tctaaaacgcgcattgaagtgcagttgaacgtaagtgaaggaaaccatat 3724
Query: 541 gctcctaagctcctcgttattcatcatctctatctgawtttcacgatagaaattatcttt 600
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 3725 gctcctaagctcctcgttattcatcatctctatctgattttcacg-tagaaattatcttt 3783
Query: 601 cggtagagcgaaagcatcwatatgttcgtcttccaacgaagtacgacgggataagamaag 660
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3784 cggtagagcgaaagcatctatatgttcgtcttccaacgaagtacgacgggataagaaaag 3843
Query: 661 tttcctgtcatccaaatcccttgcgtttcacgcatcattaatcattatattttgtatagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3844 tttcctgtcatccaaatcccttgcgtttcacgcatcattaatcattatattttgtatagt 3903
Query: 721 atttgatgtcatttaaatagattacattattaacatttaagaacgtcaccaacatcattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3904 atttgatgtcatttaaatagattacattattaacatttaagaacgtcaccaacatcattt 3963
Query: 781 ttacccatactgttttcttgttctaaggaagattcagargatcattcctgcaaataaagc 840
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3964 ttacccatactgttttcttgttctaaggaagattcagaggatcattcctgcaaataaagc 4023
Query: 841 actcggcttacttcatttatgggtaaatctgcaacaccgctagtttcattagtgatgta 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4024 actcggcttacttcatttatgggtaaatctgcaacaccgctagtttcattagtgatgta 4082
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5675
Number of Sequences: 1807
Number of extensions: 5675
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)